Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887794.1_cds_XP_016442285.1_37563
CDS Infomation

[gene=LOC107767713] [db_xref=GeneID:107767713] [protein=asparagine--tRNA ligase, cytoplasmic 1-like] [protein_id=XP_016442285.1] [location=complement(join(72814..72997,73087..73145,73665..73794,73880..74133,74864..75505,76559..76848,76930..77116))] [gbkey=CDS]
Sequence

ATGTCCGTCGACGATTCCACGCCGCAGGTGGACAAAATCTCCCTAAGTGACGGCGTTGAG
GAGGCTCAATTCTCCCAACGCGTTCCTATCCGTTCAATTCTTGGCCGTCCTGACGGCGGA
GCTGGACTCGCCGGAAAAGTTGTGAAAATTGGGGGTTGGGTTAAAACCGGTAGGGAACAG
GGAAAGNGTTCTTTTGCCTTCCTGGAAGTGAATGATGGATCATGCCCTGCAAATCTACAG
GTAATTGTGGATAGTGCTGTGTATAAACTTGGAGATTTGGTACCTACTGGCACTTGTGTG
CACGTCGAAGGTGAGCTGAAGTTACCTCCTGAAGGTGCAAAGCAAAAAGTTGAGCTTCGT
GTCCAGAAGGTTCTGTCTGTTGGTACCGTTGATGCTGGCAAGTATCCATTGCCCAAGACT
AAATTAACTCTTGAGTTTCTTAGAGATGTTGTTCATCTGCGGCCTCGAACTAATACTATA
TCTGCAGTTGCAAGAATCCGTAATGCCTTGGCTTATGCCACCCATACATTCTTTCAGAAG
AATGGCTTTCTTTATATCCACACACCAATCATCACCACCAGTGATTGCGAGGGTGCTGGC
GAGATGTTCCAGGTCACTACATTGATAAGTGAAGCTGAAAAATTGGAGAAGGAGCTGAAA
GAGAATCCTGCTCCTTCAGATTCTGACATTAAGGTTGTTGAACAGCTTGTCAAAGAGAAA
GGAGAGGCAGTTGCTAGGCTCAAAGCTGATAAGGCAAGTAGGGAAAAAGCTGGCTCCAAC
ATTGCAGCCATAAATAAGCAGATCAGTGCTGCAGTCGGTGATCTCACAAGGGCTAAAGAG
AATCTCCTGAAGTTGCAAGAGAGATTCAAATTGGGAGAGAGGGTAAAGCGCTCTGCTGGC
ATACCTAAAAAGGATGGAAACATTGATTACGCTGATGATTTCTTTGCACGTCAAGCCTTC
TTGACAGTATCTGGTCAACTCCAAGTTGAAACATATGCATGTGCACTTTCTAGTGTCTAC
ACTTTTGGGCCAACTTTTCGAGCTGAACAGTCCCACACTTCTAGGCATCTTGCAGAGTTC
TGGATGGTGGAGCCTGAAATTGCTTTTGCTGATCTCAAGGATGATATGAACTGTGCTGAG
GCATATGTGAAATTTCTCTGTCAGTGGTTGCTTGACCATTGTCTTGATGACATGGAATTT
ATCACTAAATTTATAGACAAAGGTGCTCTAGGTAGACTTAGAATGGTCACCTCATCCAAA
TTCCATCGCTTAACTTACACAGAAGCGATCGCCATTCTGGAAGAAGCATCCAAAACGAAG
ACATTTGAGAATAAAGTAGAATGGGGTATTGACTTGGCATCTGAACATGAAAGATATTTG
ACCGAAGAGCATTTTAAATCACCTGTTATAGTGTTCAACTACCCAAAAGGCATCAAAGCA
TTTTACATGAAGGTGAATGAAGACAAGAAGACAGTTGCTGCGATGGATCTGCTTGTACCA
AAGGTTGGAGAACTAATTGGAGGTAGCGAAAGGGAAGAGGATTATGAGGTTCTCAGATCA
AGGATATCGGATATGGGTCTGCCATTAGAGCCATACGAGTGGTATCTTGATTTGAGACGC
TATGGTACTGTCAAACATAGTGGTTTTGGTTTAGGCTTTGAGCGGATGATTCTTTTCGCC
ACAGGGATGGAAAACATTCGAGATGTGATTCCCTTTCCCAGATATCCAGGAAGAGCCGAT
CTATAA

Peptide Sequence

PEP ID

XP_016442285.1
PEP Infomation

PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Nicotiana tabacum]
Sequence

MSVDDSTPQVDKISLSDGVEEAQFSQRVPIRSILGRPDGGAGLAGKVVKIGGWVKTGREQ
GKXSFAFLEVNDGSCPANLQVIVDSAVYKLGDLVPTGTCVHVEGELKLPPEGAKQKVELR
VQKVLSVGTVDAGKYPLPKTKLTLEFLRDVVHLRPRTNTISAVARIRNALAYATHTFFQK
NGFLYIHTPIITTSDCEGAGEMFQVTTLISEAEKLEKELKENPAPSDSDIKVVEQLVKEK
GEAVARLKADKASREKAGSNIAAINKQISAAVGDLTRAKENLLKLQERFKLGERVKRSAG
IPKKDGNIDYADDFFARQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTSRHLAEF
WMVEPEIAFADLKDDMNCAEAYVKFLCQWLLDHCLDDMEFITKFIDKGALGRLRMVTSSK
FHRLTYTEAIAILEEASKTKTFENKVEWGIDLASEHERYLTEEHFKSPVIVFNYPKGIKA
FYMKVNEDKKTVAAMDLLVPKVGELIGGSEREEDYEVLRSRISDMGLPLEPYEWYLDLRR
YGTVKHSGFGLGFERMILFATGMENIRDVIPFPRYPGRADL

Transcript Sequence

Gene sequence data has not been registered.